Molecular Plant Systematics Laboratory (MOBİS)

About

MOBİS continues to be an extremely dynamic research environment where many undergraduate, graduate, doctoral and post-doctoral young researchers work. It has a DNA bank within the laboratory.

Research Infrastructure

• 2 Electrophoresis device
• 1 Microwave oven
• 2 Thermocycler
• 2 Transilluminators (1 UV, 1 white light)
• 1 -80 ° C deep freezer
• 2 x -20 ° C deep freezers (6 drawers)
• 1 -20 ° C deep freezer (under counter, 3 drawers)
• 1 +4 ° C Refrigerator
• 1 Gel Imaging device
• 1 Centrifuge
• 1 heat-light-humidity adjustable germination cabin
• 1 Hydrolysis device
• 1 Nanospectrophotometer
• 1 Fluorometer device
• 1 dry block
• 1 Homogenizer
• 1 Liquid nitrogen transport tank
• 3 Vortexes

Researchers

• Prof. Dr. Ali A. Donmez
• Assoc. Prof. Dr. Asli Doğru Koca
• Assoc. Prof. Dr. Zubeyde Ugurlu Aydin
• Fulya Yüceol (Dr. Inst.) / Prof. Dr. Ali A. Donmez
• Ayşe Cantaş (Dr. Lecturer) / Prof. Dr. Ali A. Donmez
• Yasin Kaya (MSc.) / Prof. Dr. Ali A. Donmez
• M. Koray Şenova (MSc.) / Prof. Dr. Ali A. Donmez
• Fatmanur Kıçar (MSc.) / Prof. Dr. Ali A. Donmez
• Büşra Süzener (MSc.) / Assoc. Dr. Asli Doğru Husband
• Nilay Şen (MSc.) / Assoc. Dr. Asli Doğru Koca

Ongoing Projects

• TÜBİTAK 1001 (Project No: 217Z132) Turkey Aubrieta Adans. Taxonomy, Phylogeny and Phylogeography of (Brassicaceae) Taxa
• TÜBİTAK 1001 (Project No: 118Z708) Taxonomy, Phylogeny and Phylocography of Turkey Polygala L.
• TÜBİTAK- International Bilateral Cooperation (Project No: 218Z029) Biodiversity and Molecular Research on Economically Important Wild Fruit Species (Pruneae and Maleae Carving-Rosaceae) Found in Azerbaijan
• TÜBİTAK- International Bilateral Cooperation (Project No: 119Z490) Evolutionary Heritage of Flora of Turkey and Its Contribution to the Formation of Plant Diversity in Europe: Evidence from Genome to Ecology
• TÜBİTAK 1001 (Project No: 119 Z 271) The Place and Revision of Tordylium (Tordyliinae, Apioideae) Species Growing in Turkey in Phylogeny
• TÜBİTAK 1001 (Project No: 119 Z 882) Revision of Gundelia L. (Kenger) Genus for Turkey

Completed Projects

• H.Ü. Scientific Research. Coordinate Projects. Unit, Comprehensive Research Project (Project No: 014 01 601 001-514) Revision of Valerianella Miller Genus (Valerianaceae) in Turkey and Its Place in Phylogeny
• TÜBİTAK 3001 (Project No: 216 Z 034) Phylogeny of Echinophora and Thecocarpus (Apioideae, Apiaceae) Genus
• TÜBİTAK 1001 (Project No: 114Z894) Barcode Gene Survey for Some Geophytes of Turkey

Publications

• Uğurlu Aydın, Z., Şenova M.K., Koch, M., Dönmez, A.A. DNA from Leaf or Stem: A Comparative Work on Dianthus L. for DNA Barcoding Analysis with Four Commercial Extraction Kits, Hacettepe Journal of Biology and Chemistry, 48 (4), 333-339, DOI: https://doi.org/10.15671 /hjbc.663505.
• Doğru-Koca, A., Bagheri, A., Moradi, A. 2020. Investigations on the phylogenetic position of the ditypic genus Froriepia reveal Yildirimlia, a new genus of Apiaceae. Taxon, early view, https://doi.org/10.1002/tax.12363.
• Brock, J.R., Dönmez, A.A., Beilstein, M.A., Olsen, K.M. 2018. Phylogenetics of Camelina Crantz. (Brassicaceae) and insights on the origin of gold-of-pleasure (Camelina sativa). Molecular Phylogenetics and Evolution. 127 / 834-842.
• Mohammadin, S., Peterse, K., van de Kerke, SJ, Dönmez, AA, Mummenhof, K., Pires, J. Ch., Edger, PP, Al-Shehbaz, I. & Schranz, ME 2017. Anatolian origins and diversification of Aethionema, the plesion of the Brassicaceae. American Journal of Botany. 104 (7): 1042-1054.
• Teresa, L., Kai, G., Özge, C., Nezaket, A., Dönmez, A., Marcel, K., Sara, M.-Q., Setareh, M., Thu-P., N ., Florian, R., Schulze, C .; Katja, S., Steinbrecher, T., Nils, W. ,, Strnad, M., M.-Scheid, O., Stephan, R. ,, Guenter, T. ,, Klaus, M., & Leubner, G . 2016. Aethionema arabicum as a model system for studying developmental control and plasticity of fruit and seed dimorphism. Plant Physiology. 172: 1-17.

Links

Official Web Page
mobis.hacettepe.edu.tr

About

MOBİS continues to be an extremely dynamic research environment where many undergraduate, graduate, doctoral and post-doctoral young researchers work. It has a DNA bank within the laboratory.

Research Infrastructure

• 2 Electrophoresis device
• 1 Microwave oven
• 2 Thermocycler
• 2 Transilluminators (1 UV, 1 white light)
• 1 -80 ° C deep freezer
• 2 x -20 ° C deep freezers (6 drawers)
• 1 -20 ° C deep freezer (under counter, 3 drawers)
• 1 +4 ° C Refrigerator
• 1 Gel Imaging device
• 1 Centrifuge
• 1 heat-light-humidity adjustable germination cabin
• 1 Hydrolysis device
• 1 Nanospectrophotometer
• 1 Fluorometer device
• 1 dry block
• 1 Homogenizer
• 1 Liquid nitrogen transport tank
• 3 Vortexes

Researchers

• Prof. Dr. Ali A. Donmez
• Assoc. Prof. Dr. Asli Doğru Koca
• Assoc. Prof. Dr. Zubeyde Ugurlu Aydin
• Fulya Yüceol (Dr. Inst.) / Prof. Dr. Ali A. Donmez
• Ayşe Cantaş (Dr. Lecturer) / Prof. Dr. Ali A. Donmez
• Yasin Kaya (MSc.) / Prof. Dr. Ali A. Donmez
• M. Koray Şenova (MSc.) / Prof. Dr. Ali A. Donmez
• Fatmanur Kıçar (MSc.) / Prof. Dr. Ali A. Donmez
• Büşra Süzener (MSc.) / Assoc. Dr. Asli Doğru Husband
• Nilay Şen (MSc.) / Assoc. Dr. Asli Doğru Koca

Ongoing Projects

• TÜBİTAK 1001 (Project No: 217Z132) Turkey Aubrieta Adans. Taxonomy, Phylogeny and Phylogeography of (Brassicaceae) Taxa
• TÜBİTAK 1001 (Project No: 118Z708) Taxonomy, Phylogeny and Phylocography of Turkey Polygala L.
• TÜBİTAK- International Bilateral Cooperation (Project No: 218Z029) Biodiversity and Molecular Research on Economically Important Wild Fruit Species (Pruneae and Maleae Carving-Rosaceae) Found in Azerbaijan
• TÜBİTAK- International Bilateral Cooperation (Project No: 119Z490) Evolutionary Heritage of Flora of Turkey and Its Contribution to the Formation of Plant Diversity in Europe: Evidence from Genome to Ecology
• TÜBİTAK 1001 (Project No: 119 Z 271) The Place and Revision of Tordylium (Tordyliinae, Apioideae) Species Growing in Turkey in Phylogeny
• TÜBİTAK 1001 (Project No: 119 Z 882) Revision of Gundelia L. (Kenger) Genus for Turkey

Completed Projects

• H.Ü. Scientific Research. Coordinate Projects. Unit, Comprehensive Research Project (Project No: 014 01 601 001-514) Revision of Valerianella Miller Genus (Valerianaceae) in Turkey and Its Place in Phylogeny
• TÜBİTAK 3001 (Project No: 216 Z 034) Phylogeny of Echinophora and Thecocarpus (Apioideae, Apiaceae) Genus
• TÜBİTAK 1001 (Project No: 114Z894) Barcode Gene Survey for Some Geophytes of Turkey

Publications

• Uğurlu Aydın, Z., Şenova M.K., Koch, M., Dönmez, A.A. DNA from Leaf or Stem: A Comparative Work on Dianthus L. for DNA Barcoding Analysis with Four Commercial Extraction Kits, Hacettepe Journal of Biology and Chemistry, 48 (4), 333-339, DOI: https://doi.org/10.15671 /hjbc.663505.
• Doğru-Koca, A., Bagheri, A., Moradi, A. 2020. Investigations on the phylogenetic position of the ditypic genus Froriepia reveal Yildirimlia, a new genus of Apiaceae. Taxon, early view, https://doi.org/10.1002/tax.12363.
• Brock, J.R., Dönmez, A.A., Beilstein, M.A., Olsen, K.M. 2018. Phylogenetics of Camelina Crantz. (Brassicaceae) and insights on the origin of gold-of-pleasure (Camelina sativa). Molecular Phylogenetics and Evolution. 127 / 834-842.
• Mohammadin, S., Peterse, K., van de Kerke, SJ, Dönmez, AA, Mummenhof, K., Pires, J. Ch., Edger, PP, Al-Shehbaz, I. & Schranz, ME 2017. Anatolian origins and diversification of Aethionema, the plesion of the Brassicaceae. American Journal of Botany. 104 (7): 1042-1054.
• Teresa, L., Kai, G., Özge, C., Nezaket, A., Dönmez, A., Marcel, K., Sara, M.-Q., Setareh, M., Thu-P., N ., Florian, R., Schulze, C .; Katja, S., Steinbrecher, T., Nils, W. ,, Strnad, M., M.-Scheid, O., Stephan, R. ,, Guenter, T. ,, Klaus, M., & Leubner, G . 2016. Aethionema arabicum as a model system for studying developmental control and plasticity of fruit and seed dimorphism. Plant Physiology. 172: 1-17.

Links

Official Web Page
mobis.hacettepe.edu.tr